BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E06LP1|AL427021
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1251 1788 0.0
>3x_Contig1251
Length = 6331
Score = 1788 bits (900), Expect = 0.0
Identities = 908/913 (99%)
Strand = Plus / Minus
Query: 1 tcccaagctggaagagtgagcnggtactagctgttcaacagtagatacgttttgcaattt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3141 tcccaagctggaagagtgagcgggtactagctgttcaacagtagatacgttttgcaattt 3082
Query: 61 tacggtcttggaattttctctagttagattaccggacaatgatagttgttgttcttttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3081 tacggtcttggaattttctctagttagattaccggacaatgatagttgttgttcttttga 3022
Query: 121 taggttttccaagtgcaagatcaccgttgtagtgacattatatgtgacttccataccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 taggttttccaagtgcaagatcaccgttgtagtgacattatatgtgacttccataccctc 2962
Query: 181 ttcatcgtgggtggcagatatgacgtggatactgtcccatttagaatcatctgattcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2961 ttcatcgtgggtggcagatatgacgtggatactgtcccatttagaatcatctgattcagc 2902
Query: 241 tttcttgaaaagaatgactcccgcgaaatcagttgattcatcaacgtcccagagatacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 tttcttgaaaagaatgactcccgcgaaatcagttgattcatcaacgtcccagagatacgt 2842
Query: 301 tgaagtgtaaccaccctcgtagtataggtccctatacaactcgaaagaattgttgcatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841 tgaagtgtaaccaccctcgtagtataggtccctatacaactcgaaagaattgttgcatgc 2782
Query: 361 wacttctagttctctcaatggctcactgggaaaaggactttctttcaaatcttcggcact 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 aacttctagttctctcaatggctcactgggaaaaggactttctttcaaatcttcggcact 2722
Query: 421 caattcagggaagtactggttagaccacggtgacctatgagaatcgatgtcacggttgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2721 caattcagggaagtactggttagaccacggtgacctatgagaatcgatgtcacggttgta 2662
Query: 481 gtcgcaacataagaattctttgttgttagcatcggtatccttcttaatggtcaatgggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2661 gtcgcaacataagaattctttgttgttagcatcggtatccttcttaatggtcaatgggat 2602
Query: 541 atcaattgaggaaagtaatccttctgcgatttcaggctccaacgcaataaggttctgtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 atcaattgaggaaagtaatccttctgcgatttcaggctccaacgcaataaggttctgtaa 2542
Query: 601 atgggttttcacctttgttggatccaatctgtataaaagctcgcaagcagcatcatattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 atgggttttcacctttgttggatccaatctgtataaaagctcgcaagcagcatcatattt 2482
Query: 661 ctcgtccacagacattctagttccgtatcttcagtatatttacaactagttaccacgctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 ctcgtccacagacattctagttccgtatcttcagtatatttacaactagttaccacgctc 2422
Query: 721 aatgagttttcttcagtttgcttgatgtatttacatttaccctttctactcctttaatga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 aatgagttttcttcagtttgcttgatgtatttacatttaccctttctactcctttaatga 2362
Query: 781 tttctttcgtagttttcctttcaatacgatcgatgatawttttctattgagagacattgc 840
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2361 tttctttcgtagttttcctttcaatacgatcgatgatatttttctattgagagacattgc 2302
Query: 841 cagtatcgcttacactagtaaaataaagtagaagcatgggaamaaaagctttgtcaattg 900
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 2301 cagtatcgcttacactagtaaaataaagtagaagcatggaaacaaaagctttgtcaattg 2242
Query: 901 catacagtacccc 913
|||||||||||||
Sbjct: 2241 catacagtacccc 2229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6638
Number of Sequences: 1807
Number of extensions: 6638
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)